Bayesian non-parametric inference for -coalescents: posterior consistency and a parametric method

نویسندگان

  • JERE KOSKELA
  • D. Spanò
چکیده

We investigate Bayesian non-parametric inference of the Λ-measure of Λ-coalescent processes with recurrent mutation, parametrised by probability measures on the unit interval. We give verifiable criteria on the prior for posterior consistency when observations form a time series, and prove that any non-trivial prior is inconsistent when all observations are contemporaneous. We then show that the likelihood given a data set of size n ∈ N is constant across Λ-measures whose leading n − 2 moments agree, and focus on inferring truncated sequences of moments. We provide a large class of functionals which can be extremised using finite computation given a credible region of posterior truncated moment sequences, and a pseudo-marginal MetropolisHastings algorithm for sampling the posterior. Finally, we compare the efficiency of the exact and noisy pseudo-marginal algorithms with and without delayed acceptance acceleration using a simulation study.

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تاریخ انتشار 2016